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Stanislaw Adaszewski
3 years ago
3 changed files with 769 additions and 29 deletions
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+729 -6docs/decagon-diagram.svg
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+2 -2src/decagon_pytorch/data.py
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+38 -21src/decagon_pytorch/layer.py
+ 729
- 6
docs/decagon-diagram.svg
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+ 2
- 2
src/decagon_pytorch/data.py
View File
| @@ -19,13 +19,13 @@ class RelationType(object): | |||
| def get_adjacency_matrix(node_type_row, node_type_column): | |||
| if self.node_type_row == node_type_row and \ | |||
| self.node_type_column = node_type_column: | |||
| self.node_type_column == node_type_column: | |||
| return self.adjacency_matrix | |||
| elif self.node_type_row == node_type_column and \ | |||
| self.node_type_column == node_type_row: | |||
| return self.adjacency_matrix.transpose(0, 1) | |||
| else: | |||
| raise ValueError('Specified row/column types do not correspond to this relation') | |||
+ 38
- 21
src/decagon_pytorch/layer.py
View File
| @@ -21,11 +21,12 @@ | |||
| import torch | |||
| from .convolve import SparseMultiDGCA | |||
| from .convolve import SparseDropoutGraphConvActivation | |||
| from .data import Data | |||
| from typing import List, \ | |||
| Union, \ | |||
| Callable | |||
| from collections import defaultdict | |||
| class Layer(torch.nn.Module): | |||
| @@ -89,30 +90,46 @@ class DecagonLayer(Layer): | |||
| def build(self): | |||
| self.convolutions = {} | |||
| for key in self.data.relation_types.keys(): | |||
| for (node_type_row, node_type_column) in self.data.relation_types.keys(): | |||
| adjacency_matrices = \ | |||
| self.data.get_adjacency_matrices(*key) | |||
| self.convolutions[key] = SparseMultiDGCA(self.input_dim, | |||
| self.data.get_adjacency_matrices(node_type_row, node_type_column) | |||
| self.convolutions[node_type_row, node_type_column] = SparseMultiDGCA(self.input_dim, | |||
| self.output_dim, adjacency_matrices, | |||
| self.keep_prob, self.rel_activation) | |||
| # for node_type_row, node_type_col in enumerate(self.data.node_ | |||
| # if rt.node_type_row == i or rt.node_type_col == i: | |||
| def __call__(self, prev_layer_repr): | |||
| new_layer_repr = [] | |||
| for i, nt in enumerate(self.data.node_types): | |||
| new_repr = [] | |||
| for key in self.data.relation_types.keys(): | |||
| nt_row, nt_col = key | |||
| if nt_row != i and nt_col != i: | |||
| continue | |||
| if nt_row == i: | |||
| x = prev_layer_repr[nt_col] | |||
| else: | |||
| x = prev_layer_repr[nt_row] | |||
| conv = self.convolutions[key] | |||
| new_repr.append(conv(x)) | |||
| new_repr = sum(new_repr) | |||
| new_layer_repr.append(new_repr) | |||
| return new_layer_repr | |||
| def __call__(self): | |||
| prev_layer_repr = self.previous_layer() | |||
| next_layer_repr = defaultdict(list) | |||
| for (nt_row, nt_col), rel in self.data.relation_types.items(): | |||
| conv = SparseDropoutGraphConvActivation(self.input_dim[nt_col], | |||
| self.output_dim[nt_row], rel.adjacency_matrix, | |||
| self.keep_prob, self.rel_activation) | |||
| next_layer_repr[nt_row].append(conv) | |||
| conv = SparseDropoutGraphConvActivation(self.input_dim[nt_row], | |||
| self.output_dim[nt_col], rel.adjacency_matrix.transpose(0, 1), | |||
| self.keep_prob, self.rel_activation) | |||
| next_layer_repr[nt_col].append(conv) | |||
| next_layer_repr = list(map(sum, next_layer_repr)) | |||
| return next_layer_repr | |||
| #for i, nt in enumerate(self.data.node_types): | |||
| # new_repr = [] | |||
| # for nt_row, nt_col in self.data.relation_types.keys(): | |||
| # if nt_row != i and nt_col != i: | |||
| # continue | |||
| # if nt_row == i: | |||
| # x = prev_layer_repr[nt_col] | |||
| # else: | |||
| # x = prev_layer_repr[nt_row] | |||
| # conv = self.convolutions[key] | |||
| # new_repr.append(conv(x)) | |||
| # new_repr = sum(new_repr) | |||
| # new_layer_repr.append(new_repr) | |||
| # return new_layer_repr | |||