IF YOU WOULD LIKE TO GET AN ACCOUNT, please write an email to s dot adaszewski at gmail dot com. User accounts are meant only to report issues and/or generate pull requests. This is a purpose-specific Git hosting for ADARED projects. Thank you for your understanding!
You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.

107 lines
3.4KB

  1. #
  2. # Copyright (C) Stanislaw Adaszewski, 2020
  3. # License: GPLv3
  4. #
  5. import torch
  6. from .data import Data
  7. from .trainprep import PreparedData, \
  8. TrainValTest
  9. from typing import Type, \
  10. List, \
  11. Callable, \
  12. Union, \
  13. Dict, \
  14. Tuple
  15. from .decode import DEDICOMDecoder
  16. from dataclasses import dataclass
  17. @dataclass
  18. class RelationPredictions(object):
  19. edges_pos: TrainValTest
  20. edges_neg: TrainValTest
  21. edges_back_pos: TrainValTest
  22. edges_back_neg: TrainValTest
  23. @dataclass
  24. class RelationFamilyPredictions(object):
  25. relation_types: List[RelationPredictions]
  26. @dataclass
  27. class Predictions(object):
  28. relation_families: List[RelationFamilyPredictions]
  29. class DecodeLayer(torch.nn.Module):
  30. def __init__(self,
  31. input_dim: List[int],
  32. data: PreparedData,
  33. keep_prob: float = 1.,
  34. activation: Callable[[torch.Tensor], torch.Tensor] = torch.sigmoid,
  35. **kwargs) -> None:
  36. super().__init__(**kwargs)
  37. if not isinstance(input_dim, list):
  38. raise TypeError('input_dim must be a List')
  39. if len(input_dim) != len(data.node_types):
  40. raise ValueError('input_dim must have length equal to num_node_types')
  41. if not all([ a == input_dim[0] for a in input_dim ]):
  42. raise ValueError('All elements of input_dim must have the same value')
  43. if not isinstance(data, PreparedData):
  44. raise TypeError('data must be an instance of PreparedData')
  45. self.input_dim = input_dim[0]
  46. self.output_dim = 1
  47. self.data = data
  48. self.keep_prob = keep_prob
  49. self.activation = activation
  50. self.decoders = None
  51. self.build()
  52. def build(self) -> None:
  53. self.decoders = torch.nn.ModuleList()
  54. for fam in self.data.relation_families:
  55. dec = fam.decoder_class(self.input_dim, len(fam.relation_types),
  56. self.keep_prob, self.activation)
  57. self.decoders.append(dec)
  58. def _get_tvt(self, r, edge_list_attr_names, row, column, k, last_layer_repr, dec):
  59. pred = []
  60. for p in edge_list_attr_names:
  61. tvt = []
  62. for t in ['train', 'val', 'test']:
  63. # print('r:', r)
  64. edges = getattr(getattr(r, p), t)
  65. inputs_row = last_layer_repr[row][edges[:, 0]]
  66. inputs_column = last_layer_repr[column][edges[:, 1]]
  67. tvt.append(dec(inputs_row, inputs_column, k))
  68. tvt = TrainValTest(*tvt)
  69. pred.append(tvt)
  70. return pred
  71. def forward(self, last_layer_repr: List[torch.Tensor]) -> List[List[torch.Tensor]]:
  72. res = []
  73. for i, fam in enumerate(self.data.relation_families):
  74. fam_pred = []
  75. for k, r in enumerate(fam.relation_types):
  76. pred = []
  77. pred += self._get_tvt(r, ['edges_pos', 'edges_neg'],
  78. r.node_type_row, r.node_type_column, k, last_layer_repr, self.decoders[i])
  79. pred += self._get_tvt(r, ['edges_back_pos', 'edges_back_neg'],
  80. r.node_type_column, r.node_type_row, k, last_layer_repr, self.decoders[i])
  81. pred = RelationPredictions(*pred)
  82. fam_pred.append(pred)
  83. fam_pred = RelationFamilyPredictions(fam_pred)
  84. res.append(fam_pred)
  85. res = Predictions(res)
  86. return res