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Merge pull request 'master' (#1) from sadaszewski1/wba:master into master

master
sadaszewski 4 years ago
parent
d02bc5cf76 df6f40b92d
commit
f98744314b
100 changed files with 7842 additions and 0 deletions
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  1. +9
    -0
      .gitignore
  2. +77
    -0
      backend/keephelper/__main__.py
  3. +42
    -0
      backend/nginx/conf/nginx.conf
  4. +15
    -0
      backend/srv.py
  5. +4
    -0
      backend/supervisord/supervisord.conf
  6. +10
    -0
      dockerfiles/wba/Dockerfile
  7. +18
    -0
      dockerfiles/wba/files/default.conf
  8. +41
    -0
      dockerfiles/wba/files/wba/nginx/conf/nginx.conf
  9. +0
    -0
      dockerfiles/wba/files/wba/nginx/run/.keep
  10. +0
    -0
      dockerfiles/wba/files/wba/nginx/tmp/.keep
  11. +0
    -0
      dockerfiles/wba/files/wba/supervisord/run/.keep
  12. +8
    -0
      dockerfiles/wba/files/wba/supervisord/supervisord.conf
  13. +731
    -0
      frontend/package-lock.json
  14. +32
    -0
      frontend/package.json
  15. +67
    -0
      frontend/rollup.config.js
  16. +27
    -0
      frontend/src/css/index.css
  17. +25
    -0
      frontend/src/html/index.html
  18. +20
    -0
      frontend/src/js/arvados/base/arvados-object-name.js
  19. +28
    -0
      frontend/src/js/arvados/base/arvados-type-name.js
  20. +34
    -0
      frontend/src/js/arvados/base/detect-hashes.js
  21. +34
    -0
      frontend/src/js/arvados/base/detect-uuids.js
  22. +51
    -0
      frontend/src/js/arvados/base/fetch-object-parents.js
  23. +67
    -0
      frontend/src/js/arvados/base/make-arvados-request.js
  24. +35
    -0
      frontend/src/js/arvados/base/url-for-object.js
  25. +18
    -0
      frontend/src/js/arvados/base/wb-delete-object.js
  26. +45
    -0
      frontend/src/js/arvados/base/wb-fetch-objects.js
  27. +79
    -0
      frontend/src/js/arvados/base/wb-id-tools.js
  28. +20
    -0
      frontend/src/js/arvados/base/wb-move-object.js
  29. +23
    -0
      frontend/src/js/arvados/base/wb-rename-object.js
  30. +23
    -0
      frontend/src/js/arvados/base/wb-update-field.js
  31. +32
    -0
      frontend/src/js/arvados/collection/wb-copy-collection.js
  32. +64
    -0
      frontend/src/js/arvados/collection/wb-download-file.js
  33. +35
    -0
      frontend/src/js/arvados/collection/wb-manifest-worker-wrapper.js
  34. +21
    -0
      frontend/src/js/arvados/process/wb-input-spec-info.js
  35. +18
    -0
      frontend/src/js/arvados/process/wb-parse-workflow-def.js
  36. +18
    -0
      frontend/src/js/arvados/process/wb-process-misc.js
  37. +27
    -0
      frontend/src/js/arvados/process/wb-process-state-name.js
  38. +169
    -0
      frontend/src/js/arvados/process/wb-submit-container-request.js
  39. +32
    -0
      frontend/src/js/arvados/process/wb-uuids-to-cwl.js
  40. +55
    -0
      frontend/src/js/component/wb-arvados-crumbs.js
  41. +251
    -0
      frontend/src/js/component/wb-collection-content.js
  42. +99
    -0
      frontend/src/js/component/wb-collection-fields.js
  43. +191
    -0
      frontend/src/js/component/wb-collection-listing.js
  44. +79
    -0
      frontend/src/js/component/wb-common-fields.js
  45. +114
    -0
      frontend/src/js/component/wb-container-fields.js
  46. +139
    -0
      frontend/src/js/component/wb-container-request-fields.js
  47. +22
    -0
      frontend/src/js/component/wb-inline-search.js
  48. +85
    -0
      frontend/src/js/component/wb-json-editor.js
  49. +50
    -0
      frontend/src/js/component/wb-json-viewer.js
  50. +66
    -0
      frontend/src/js/component/wb-lazy-inline-name.js
  51. +82
    -0
      frontend/src/js/component/wb-live-logs.js
  52. +130
    -0
      frontend/src/js/component/wb-name-and-uuid.js
  53. +38
    -0
      frontend/src/js/component/wb-navbar-common.js
  54. +60
    -0
      frontend/src/js/component/wb-path-display.js
  55. +141
    -0
      frontend/src/js/component/wb-process-dashboard.js
  56. +155
    -0
      frontend/src/js/component/wb-process-listing.js
  57. +64
    -0
      frontend/src/js/component/wb-process-state.js
  58. +77
    -0
      frontend/src/js/component/wb-project-fields.js
  59. +110
    -0
      frontend/src/js/component/wb-project-listing.js
  60. +75
    -0
      frontend/src/js/component/wb-user-listing.js
  61. +112
    -0
      frontend/src/js/component/wb-workflow-fields.js
  62. +78
    -0
      frontend/src/js/component/wb-workflow-input.js
  63. +116
    -0
      frontend/src/js/component/wb-workflow-listing.js
  64. +50
    -0
      frontend/src/js/deprecated/fetch-project-parents.js
  65. +57
    -0
      frontend/src/js/deprecated/wb-arvados-collection.js
  66. +42
    -0
      frontend/src/js/deprecated/wb-browse-dialog.js
  67. +187
    -0
      frontend/src/js/deprecated/wb-collection-manifest.js
  68. +72
    -0
      frontend/src/js/deprecated/wb-download-file.js
  69. +188
    -0
      frontend/src/js/deprecated/wb-manifest-reader.js
  70. +46
    -0
      frontend/src/js/deprecated/wb-project-crumbs.js
  71. +89
    -0
      frontend/src/js/deprecated/wb-rootdir-wrapper.js
  72. +125
    -0
      frontend/src/js/dialog/wb-browse-dialog-collection-content.js
  73. +78
    -0
      frontend/src/js/dialog/wb-browse-dialog-collection-list.js
  74. +113
    -0
      frontend/src/js/dialog/wb-browse-dialog-project-list.js
  75. +78
    -0
      frontend/src/js/dialog/wb-browse-dialog-user-list.js
  76. +269
    -0
      frontend/src/js/dialog/wb-browse-dialog.js
  77. +60
    -0
      frontend/src/js/dialog/wb-delete-dialog.js
  78. +59
    -0
      frontend/src/js/dialog/wb-edit-description-dialog.js
  79. +73
    -0
      frontend/src/js/dialog/wb-new-project-dialog.js
  80. +118
    -0
      frontend/src/js/dialog/wb-pick-object-dialog.js
  81. +52
    -0
      frontend/src/js/dialog/wb-rename-dialog.js
  82. +154
    -0
      frontend/src/js/dialog/wb-toolbox-dialog.js
  83. +13
    -0
      frontend/src/js/index.js
  84. +120
    -0
      frontend/src/js/misc/wb-apply-promise-ordering.js
  85. +19
    -0
      frontend/src/js/misc/wb-disable-controls.js
  86. +19
    -0
      frontend/src/js/misc/wb-format-date.js
  87. +18
    -0
      frontend/src/js/misc/wb-format-special-value.js
  88. +120
    -0
      frontend/src/js/page/wb-app.js
  89. +255
    -0
      frontend/src/js/page/wb-browse.js
  90. +32
    -0
      frontend/src/js/page/wb-collection-browse.js
  91. +36
    -0
      frontend/src/js/page/wb-collection-view.js
  92. +40
    -0
      frontend/src/js/page/wb-container-view.js
  93. +133
    -0
      frontend/src/js/page/wb-download-page.js
  94. +110
    -0
      frontend/src/js/page/wb-image-viewer-page.js
  95. +27
    -0
      frontend/src/js/page/wb-landing-page.js
  96. +185
    -0
      frontend/src/js/page/wb-launch-workflow-page.js
  97. +95
    -0
      frontend/src/js/page/wb-process-view.js
  98. +36
    -0
      frontend/src/js/page/wb-project-view.js
  99. +177
    -0
      frontend/src/js/page/wb-sharing-page.js
  100. +109
    -0
      frontend/src/js/page/wb-sign-in.js

+ 9
- 0
.gitignore View File

@@ -0,0 +1,9 @@
__pycache__
*.pyc
node_modules
/frontend/dist/
/backend/server.pem
/testdata/
/backend/supervisord/supervisord.log
/dockerfiles/wba/files/wba/dist
/package-lock.json

+ 77
- 0
backend/keephelper/__main__.py View File

@@ -0,0 +1,77 @@
import aiohttp
from aiohttp import web
from argparse import ArgumentParser
import ssl
import json
def options_fetch_blocks(request):
return web.Response(headers={ 'Access-Control-Allow-Origin': '*' })
async def post_fetch_blocks(request):
body = await request.read()
body = json.loads(body)
proxy_host = body['keepProxyHost']
arv_token = body['arvToken']
segments = body['segments']
use_ssl = body['useSsl'] \
if 'useSsl' in body \
else True
protocol = 'https://' \
if use_ssl \
else 'http://'
name = body['name'] \
if 'name' in body \
else None
content_type = body['contentType'] \
if 'contentType' in body \
else 'application/octet-stream'
res = web.StreamResponse()
res.content_type = content_type
if name:
res.headers['Content-Disposition'] = 'attachment; filename*=UTF-8\'\'"' + name + '"'
else:
res.headers['Content-Disposition'] = 'inline'
res.headers['Access-Control-Allow-Origin'] = '*'
await res.prepare(request)
async with aiohttp.ClientSession(connector=aiohttp.TCPConnector(verify_ssl=False)) as session:
for seg in segments:
url = protocol + proxy_host + '/' + seg[0]
async with session.get(url, headers={ 'Authorization': 'OAuth2 ' + arv_token }) as response:
block = await response.read()
block = block[seg[1]:seg[2]]
await res.write(block)
return res
def get_index(request):
return web.Response(text='Use /fetch-blocks to stream files from Keep')
def create_parser():
parser = ArgumentParser()
parser.add_argument('--port', type=int, default=50080)
parser.add_argument('--ssl-cert', type=str, default=None)
return parser
def main():
parser = create_parser()
args = parser.parse_args()
app = web.Application()
app.add_routes([
web.get('/', get_index),
web.post('/fetch-blocks', post_fetch_blocks),
web.options('/fetch-blocks', options_fetch_blocks)
])
if args.ssl_cert:
ssl_context = ssl.SSLContext(ssl.PROTOCOL_SSLv23)
ssl_context.load_cert_chain(args.ssl_cert)
else:
ssl_context = None
web.run_app(app, port=args.port, ssl_context=ssl_context)
if __name__ == '__main__':
main()

+ 42
- 0
backend/nginx/conf/nginx.conf View File

@@ -0,0 +1,42 @@
error_log /dev/null;
pid nginx.pid;
daemon off;
events {
}
http {
include /pstore/data/data_science/app/modules/nginx-1.17.8/conf/mime.types;
access_log /dev/null;
server {
listen 50080;
server_name rkalbhpc002.kau.roche.com;
client_body_temp_path tmp/client_body_temp;
fastcgi_temp_path tmp/fastcgi_temp;
proxy_temp_path tmp/proxy_temp;
scgi_temp_path tmp/scgi_temp;
uwsgi_temp_path tmp/uwsgi_temp;
if ( $request_uri ~ \.(js|css|html|woff|ttf|svg|woff2|eot|svg)$ ) {
break;
}
if ( $request_uri ~ ^/fetch-blocks$ ) {
break;
}
rewrite .* /index.html;
location / {
root /pstore/home/adaszews/workspace/arvados-workbench-advanced/frontend/dist;
index index.html;
}
location /fetch-blocks {
proxy_pass http://localhost:12358/fetch-blocks;
}
}
}

+ 15
- 0
backend/srv.py View File

@@ -0,0 +1,15 @@
import BaseHTTPServer, SimpleHTTPServer
import ssl

class RequestHandler(SimpleHTTPServer.SimpleHTTPRequestHandler):
def do_GET(self):
print(self.path)
if '.' not in self.path:
self.path = '/'
SimpleHTTPServer.SimpleHTTPRequestHandler.do_GET(self)
# RequestHandler, self).do_GET()

httpd = BaseHTTPServer.HTTPServer(('0.0.0.0', 4445), RequestHandler)
httpd.socket = ssl.wrap_socket (httpd.socket, certfile='/pstore/home/adaszews/workspace/arvados-workbench-advanced/backend/server.pem', server_side=True)
httpd.serve_forever()


+ 4
- 0
backend/supervisord/supervisord.conf View File

@@ -0,0 +1,4 @@
[supervisord]

[program:wba-nginx]
command=/pstore/data/data_science/app/modules/nginx-1.17.8/sbin/nginx -p /pstore/home/adaszews/workspace/arvados-workbench-advanced/backend/nginx

+ 10
- 0
dockerfiles/wba/Dockerfile View File

@@ -0,0 +1,10 @@
FROM alpine:3.11.3

RUN apk update && \
apk add nginx gettext supervisor

COPY files/wba /wba

RUN chown -R nginx /wba/nginx/tmp /wba/nginx/run

ENTRYPOINT /bin/sh -c "cd /wba/supervisord/run && /usr/bin/supervisord -c /wba/supervisord/supervisord.conf"

+ 18
- 0
dockerfiles/wba/files/default.conf View File

@@ -0,0 +1,18 @@
# This is a default site configuration which will simply return 404, preventing
# chance access to any other virtualhost.

server {
listen ${PORT0} default_server;
listen [::]:${PORT0} default_server;

# Everything is a 404
location / {
return 404;
}

# You may need this to prevent return 404 recursion.
location = /404.html {
internal;
}
}


+ 41
- 0
dockerfiles/wba/files/wba/nginx/conf/nginx.conf View File

@@ -0,0 +1,41 @@
error_log /dev/null;
pid run/nginx.pid;
daemon off;
events {
}
http {
include /etc/nginx/mime.types;
access_log /dev/null;
server {
listen ${PORT0};
server_name wba.ecaas.emea.roche.com;
client_body_temp_path tmp/client_body_temp;
fastcgi_temp_path tmp/fastcgi_temp;
proxy_temp_path tmp/proxy_temp;
scgi_temp_path tmp/scgi_temp;
uwsgi_temp_path tmp/uwsgi_temp;
if ( $request_uri ~ \.(js|css|html|woff|ttf|svg|woff2|eot|svg)$ ) {
break;
}
if ( $request_uri ~ ^/fetch-blocks$ ) {
break;
}
rewrite .* /index.html;
location / {
root /wba/dist;
index index.html;
}
location /fetch-blocks {
proxy_pass http://localhost:12358/fetch-blocks;
}
}
}

+ 0
- 0
dockerfiles/wba/files/wba/nginx/run/.keep View File


+ 0
- 0
dockerfiles/wba/files/wba/nginx/tmp/.keep View File


+ 0
- 0
dockerfiles/wba/files/wba/supervisord/run/.keep View File


+ 8
- 0
dockerfiles/wba/files/wba/supervisord/supervisord.conf View File

@@ -0,0 +1,8 @@
[supervisord]
logfile=/dev/null
nodaemon=true
user=root

[program:wba-nginx]
command=/usr/sbin/nginx -p /wba/nginx -c conf/nginx.conf
user=nginx

+ 731
- 0
frontend/package-lock.json View File

@@ -0,0 +1,731 @@
{
"requires": true,
"lockfileVersion": 1,
"dependencies": {
"@babel/code-frame": {
"version": "7.8.3",
"resolved": "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.8.3.tgz",
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"requires": {
"@babel/highlight": "7.8.3"
}
},
"@babel/highlight": {
"version": "7.8.3",
"resolved": "https://registry.npmjs.org/@babel/highlight/-/highlight-7.8.3.tgz",
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"requires": {
"chalk": "2.4.2",
"esutils": "2.0.3",
"js-tokens": "4.0.0"
}
},
"@babel/runtime": {
"version": "7.8.4",
"resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.8.4.tgz",
"integrity": "sha512-neAp3zt80trRVBI1x0azq6c57aNBqYZH8KhMm3TaB7wEI5Q4A2SHfBHE8w9gOhI/lrqxtEbXZgQIrHP+wvSGwQ==",
"requires": {
"regenerator-runtime": "0.13.3"
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"@fortawesome/fontawesome-free": {
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"@types/estree": {
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"minimist": "1.2.0",
"os-homedir": "2.0.0",
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+ 32
- 0
frontend/package.json View File

@@ -0,0 +1,32 @@
{
"dependencies": {
"@fortawesome/fontawesome-free": "^5.12.0",
"bootstrap": "^4.4.1",
"crypto-js": "^3.1.9-1",
"filesize": "^6.0.1",
"history": "^4.10.1",
"jquery": "^3.4.1",
"js-uuid": "0.0.6",
"js-yaml": "^3.13.1",
"linkstate": "^1.1.1",
"papaya-viewer": "^1.0.1449",
"popper.js": "^1.16.1",
"preact": "^8.2.9",
"preact-router": "^2.6.1",
"rollup": "^0.66.6",
"rollup-plugin-buble": "^0.19.2",
"rollup-plugin-copy": "^0.2.3",
"rollup-plugin-includepaths": "^0.2.3",
"rollup-plugin-license": "^0.7.0",
"rollup-plugin-minify": "^1.0.3",
"rollup-plugin-node-resolve": "^3.3.0",
"rollup-plugin-uglify": "^6.0.4",
"streamsaver": "^2.0.3",
"watch": "^1.0.2",
"web-streams-polyfill": "^2.0.6"
},
"scripts": {
"rollup": "rollup -c",
"watch": "watch \"rollup -c\" src"
}
}

+ 67
- 0
frontend/rollup.config.js View File

@@ -0,0 +1,67 @@
import resolve from 'rollup-plugin-node-resolve'
import buble from 'rollup-plugin-buble';
import copy from 'rollup-plugin-copy';
import includePaths from 'rollup-plugin-includepaths';
import license from 'rollup-plugin-license';
import { uglify } from "rollup-plugin-uglify";
export default {
// dest: 'dist/js/app.js',
input: 'src/js/index.js',
output: {
file: 'dist/js/app.min.js',
name: 'WBADV',
format: 'umd',
sourceMap: true
},
plugins: [
includePaths({
paths: ['src/js', 'src/js/widget', 'src/js/misc', 'src/js/component',
'src/js/page', 'src/js/dialog', 'src/js/arvados/base',
'src/js/arvados/collection', 'src/js/arvados/process']
}),
copy({
'src/html/index.html': 'dist/index.html',
'src/css/index.css': 'dist/css/index.css',
'node_modules/bootstrap/dist/css/bootstrap.min.css': 'dist/css/bootstrap.min.css',
'node_modules/bootstrap/dist/js/bootstrap.min.js': 'dist/js/bootstrap.min.js',
'node_modules/jquery/dist/jquery.min.js': 'dist/js/jquery.min.js',
'node_modules/@fortawesome/fontawesome-free/js/fontawesome.min.js': 'dist/js/fontawesome.min.js',
'node_modules/@fortawesome/fontawesome-free/css/all.min.css': 'dist/css/all.min.css',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-regular-400.eot': 'dist/webfonts/fa-regular-400.eot',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-regular-400.svg': 'dist/webfonts/fa-regular-400.svg',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-regular-400.ttf': 'dist/webfonts/fa-regular-400.ttf',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-regular-400.woff': 'dist/webfonts/fa-regular-400.woff',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-regular-400.woff2': 'dist/webfonts/fa-regular-400.woff2',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-solid-900.eot': 'dist/webfonts/fa-solid-900.eot',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-solid-900.svg': 'dist/webfonts/fa-solid-900.svg',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-solid-900.ttf': 'dist/webfonts/fa-solid-900.ttf',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-solid-900.woff': 'dist/webfonts/fa-solid-900.woff',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-solid-900.woff2': 'dist/webfonts/fa-solid-900.woff2',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-brands-400.eot': 'dist/webfonts/fa-brands-400.eot',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-brands-400.svg': 'dist/webfonts/fa-brands-400.svg',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-brands-400.ttf': 'dist/webfonts/fa-brands-400.ttf',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-brands-400.woff': 'dist/webfonts/fa-brands-400.woff',
'node_modules/@fortawesome/fontawesome-free/webfonts/fa-brands-400.woff2': 'dist/webfonts/fa-brands-400.woff2',
'node_modules/js-uuid/js-uuid.js': 'dist/js/js-uuid.js',
'node_modules/filesize/lib/filesize.js': 'dist/js/filesize.js',
'node_modules/crypto-js/core.js': 'dist/js/crypto-js/core.js',
'node_modules/crypto-js/md5.js': 'dist/js/crypto-js/md5.js',
'src/js/worker/wb-manifest-worker.js': 'dist/js/wb-manifest-worker.js',
'node_modules/js-yaml/dist/js-yaml.min.js': 'dist/js/js-yaml.min.js',
'node_modules/streamsaver/mitm.html': 'dist/mitm.html',
'node_modules/streamsaver/sw.js': 'dist/sw.js',
'src/js/thirdparty/StreamSaver.js': 'dist/js/StreamSaver.js',
'node_modules/web-streams-polyfill/dist/ponyfill.js': 'dist/js/web-streams-polyfill/ponyfill.js',
'node_modules/papaya-viewer/release/current/standard/papaya.js': 'dist/js/papaya.js',
'node_modules/papaya-viewer/release/current/standard/papaya.css': 'dist/css/papaya.css',
verbose: true
}),
buble({jsx: 'h', objectAssign: 'Object.assign'}),
resolve({}),
license({
banner: 'Copyright (C) Stanislaw Adaszewski, 2020.\nContact: s.adaszewski@gmail.com\nAll Rights Reserved.',
}),
// uglify()
]
}

+ 27
- 0
frontend/src/css/index.css View File

@@ -0,0 +1,27 @@
pre.word-wrap {
white-space: pre-wrap; /* Since CSS 2.1 */
white-space: -moz-pre-wrap; /* Mozilla, since 1999 */
white-space: -pre-wrap; /* Opera 4-6 */
white-space: -o-pre-wrap; /* Opera 7 */
word-wrap: break-word; /* Internet Explorer 5.5+ */
}
pre.terminal {
background: black;
color: #aaa;
height: 600px;
width: 100%;
}
.w-1 {
width: 1px !important;
}
div.wb-json-viewer {
font-family: "Courier New", fixed-width;
white-space: pre-wrap;
}
textarea.wb-json-editor {
font-family: "Courier New", fixed-width;
}

+ 25
- 0
frontend/src/html/index.html View File

@@ -0,0 +1,25 @@
<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<link rel="stylesheet" type="text/css" href="/css/bootstrap.min.css" />
<link rel="stylesheet" type="text/css" href="/css/all.min.css" />
<link rel="stylesheet" type="text/css" href="/css/index.css" />
<link rel="stylesheet" type="text/css" href="/css/papaya.css" />
<script language="javascript" src="/js/web-streams-polyfill/ponyfill.js"></script>
<script language="javascript">
window.process = { 'env': { 'NODE_ENV': 'production' } };
</script>
<script language="javascript" src="/js/jquery.min.js"></script>
<script language="javascript" src="/js/bootstrap.min.js"></script>
<script language="javascript" src="/js/fontawesome.min.js"></script>
<script language="javascript" src="/js/js-uuid.js"></script>
<script language="javascript" src="/js/filesize.js"></script>
<script language="javascript" src="/js/crypto-js/core.js"></script>
<script language="javascript" src="/js/crypto-js/md5.js"></script>
<script language="javascript" src="/js/js-yaml.min.js"></script>
<script language="javascript" src="/js/StreamSaver.js"></script>
</head>
<body>
<script language="javascript" src="/js/app.min.js"></script>
</body>
</html>

+ 20
- 0
frontend/src/js/arvados/base/arvados-object-name.js View File

@@ -0,0 +1,20 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import arvadosTypeName from 'arvados-type-name';
function arvadosObjectName(item) {
let typeName = arvadosTypeName(item['uuid']);
if (typeName === 'user')
return (item.first_name + ' ' + item.last_name);
else if (typeName === 'container')
return ('Container running image ' + item.container_image);
else
return item.name;
}
export default arvadosObjectName;

+ 28
- 0
frontend/src/js/arvados/base/arvados-type-name.js View File

@@ -0,0 +1,28 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
const typeIdToName = {
'tpzed': 'user',
'j7d0g': 'group',
'xvhdp': 'container_request',
'dz642': 'container',
'7fd4e': 'workflow',
'ozdt8': 'api_client',
'4zz18': 'collection'
};
function arvadosTypeName(id) {
if (!id)
return;
if (id.length === 5)
return typeIdToName[id];
else
return typeIdToName[id.split('-')[1]];
}
export default arvadosTypeName;

+ 34
- 0
frontend/src/js/arvados/base/detect-hashes.js View File

@@ -0,0 +1,34 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function detectHashes(obj) {
let Q = [ obj ];
let matches = {};
while (Q.length > 0) {
let item = Q.pop();
if (!item)
continue;
if (typeof(item) === 'string') {
// use regexes
let rx = /[a-f0-9]{32}\+[0-9]+/g;
for (let m = rx.exec(item); m; m = rx.exec(item))
matches[m[0]] = true;
} else if (typeof(item) === 'object') {
Object.keys(item).map(k => Q.push(item[k]));
}
}
matches = Object.keys(matches);
return matches;
}
export default detectHashes;

+ 34
- 0
frontend/src/js/arvados/base/detect-uuids.js View File

@@ -0,0 +1,34 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function detectUuids(obj) {
let Q = [ obj ];
let matches = {};
while (Q.length > 0) {
let item = Q.pop();
if (!item)
continue;
if (typeof(item) === 'string') {
// use regexes
let rx = /[a-z0-9]{5}-[a-z0-9]{5}-[a-z0-9]{15}/g;
for (let m = rx.exec(item); m; m = rx.exec(item))
matches[m[0]] = true;
} else if (typeof(item) === 'object') {
Object.keys(item).map(k => Q.push(item[k]));
}
}
matches = Object.keys(matches);
return matches;
}
export default detectUuids;

+ 51
- 0
frontend/src/js/arvados/base/fetch-object-parents.js View File

@@ -0,0 +1,51 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
import arvadosObjectName from 'arvados-object-name';
function fetchObjectParents(arvHost, arvToken, uuid) {
let parents = [];
let cb = xhr => {
const item = xhr.response.items[0];
if (!item)
return parents.reverse();
item.name = arvadosObjectName(item);
parents.push(item);
if (!item.owner_uuid ||
item.owner_uuid.endsWith('-tpzed-000000000000000')) {
return parents.reverse();
}
const objectType = arvadosTypeName(item.owner_uuid);
const filters = [
['uuid', '=', item.owner_uuid]
];
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + objectType + 's' +
'?filters=' + encodeURIComponent(JSON.stringify(filters))).then(cb);
};
const objectType = arvadosTypeName(uuid);
const filters = [
['uuid', '=', uuid]
];
let prom = makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + objectType + 's' +
'?filters=' + encodeURIComponent(JSON.stringify(filters)));
prom = prom.then(cb);
return prom;
}
export default fetchObjectParents;

+ 67
- 0
frontend/src/js/arvados/base/make-arvados-request.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import wbApplyPromiseOrdering from 'wb-apply-promise-ordering';
const requestPromiseOrdering = {};
function makeArvadosRequest(arvHost, arvToken, endpoint, params={}) {
const defaultParams = {
'method': 'GET',
'data': null,
'contentType': 'application/json;charset=utf-8',
'responseType': 'json',
'useSsl': true,
'requireToken': true,
'onProgress': () => {},
'promiseOrdering': true,
'expectedStatus': 200
};
Object.keys(defaultParams).map(k => (params[k] =
(k in params ? params[k] : defaultParams[k])));
let { method, data, contentType, responseType,
useSsl, requireToken, onProgress, promiseOrdering,
expectedStatus } = params;
if (!(arvHost && (arvToken || !requireToken)))
return new Promise((accept, reject) => reject());
let xhr = new XMLHttpRequest();
xhr.open(method, (useSsl ? 'https://' : 'http://') + arvHost + endpoint);
if (arvToken)
xhr.setRequestHeader('Authorization', 'OAuth2 ' + arvToken);
if (data !== null)
xhr.setRequestHeader('Content-Type', contentType);
xhr.responseType = responseType;
xhr.onprogress = onProgress;
let prom = new Promise((accept, reject) => {
xhr.onreadystatechange = () => {
if (xhr.readyState !== 4)
return;
if ((expectedStatus instanceof Array) &&
expectedStatus.indexOf(xhr.status) !== -1) {
accept(xhr);
} else if (expectedStatus === xhr.status) {
accept(xhr);
} else {
reject(xhr);
}
};
xhr.send(data);
});
if (promiseOrdering)
prom = wbApplyPromiseOrdering(prom, requestPromiseOrdering);
return prom;
}
export default makeArvadosRequest;

+ 35
- 0
frontend/src/js/arvados/base/url-for-object.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import arvadosTypeName from 'arvados-type-name';
function urlForObject(item, mode='primary') {
let objectType = arvadosTypeName(item.uuid.split('-')[1]);
if (objectType === 'user')
return ('/browse/' + item.uuid);
else if (objectType === 'group' && item.group_class === 'project') {
if (mode === 'properties')
return ('/project/' + item.uuid);
else
return ('/browse/' + item.uuid);
} else if (objectType === 'container_request')
return ('/process/' + item.uuid);
else if (objectType === 'workflow') {
if (mode === 'launch')
return ('/workflow-launch/' + item.uuid)
else
return ('/workflow/' + item.uuid);
} else if (objectType === 'collection') {
if (mode === 'primary' || mode === 'browse')
return ('/collection-browse/' + item.uuid);
else
return ('/collection/' + item.uuid);
} else if (objectType === 'container')
return ('/container/' + item.uuid);
}
export default urlForObject;

+ 18
- 0
frontend/src/js/arvados/base/wb-delete-object.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
function wbDeleteObject(arvHost, arvToken, uuid) {
const typeName = arvadosTypeName(uuid);
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + typeName + 's/' +
uuid, { 'method': 'DELETE' });
}
export default wbDeleteObject;

+ 45
- 0
frontend/src/js/arvados/base/wb-fetch-objects.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import arvadosTypeName from 'arvados-type-name';
import makeArvadosRequest from 'make-arvados-request';
function wbFetchObjects(arvHost, arvToken, uuids) {
const unique = {};
uuids.map(u => (unique[u] = true));
uuids = {};
Object.keys(unique).map(u => {
let typeName = arvadosTypeName(u);
if (!typeName) {
console.log('Unknown type name for UUID: ' + u);
return;
}
if (!(typeName in uuids))
uuids[typeName] = [];
uuids[typeName].push(u);
});
const lookup = {};
let prom = new Promise(accept => accept());
for (let typeName in uuids) {
let filters = [
['uuid', 'in', uuids[typeName]]
];
prom = prom.then(() => makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + typeName + 's?filters=' +
encodeURIComponent(JSON.stringify(filters))));
prom = prom.then(xhr => xhr.response.items.map(it => (
lookup[it.uuid] = it)));
prom = prom.catch(xhr => console.log(xhr.responseURL + ': ' + xhr.statusText));
}
prom = prom.then(() => lookup);
return prom;
}
export default wbFetchObjects;

+ 79
- 0
frontend/src/js/arvados/base/wb-id-tools.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import arvadosTypeName from 'arvados-type-name';
const UUID_PATTERN = '[a-z0-9]{5}-[a-z0-9]{5}-[a-z0-9]{15}';
const PDH_PATTERN = '[a-f0-9]{32}\\+[0-9]+';
const UUID_REGEX = new RegExp(UUID_PATTERN);
const PDH_REGEX = new RegExp(PDH_PATTERN);
const UUID_REGEX_G = new RegExp(UUID_PATTERN, 'g');
const PDH_REGEX_G = new RegExp(PDH_PATTERN, 'g');
class WBIdTools {
static isIdentifier(value) {
return ( this.isUuid(value) || this.isPDH(value) );
}
static isUuid(value) {
const m = UUID_REGEX.exec(value);
return (m && m[0] === value);
}
static isPDH(value) {
const m = PDH_REGEX.exec(value);
return (m && m[0] === value);
}
static startsWithIdentifier(value) {
return ( this.startsWithUuid(value) || this.startsWithPDH(value) );
}
static startsWithUuid(value) {
const m = UUID_REGEX.exec(value);
return ( m && m.index === 0 );
}
static startsWithPDH(value) {
const m = PDH_REGEX.exec(value);
return ( m && m.index === 0 );
}
static detectIdentifiers(value) {
return this.detectUuids(value).concat(this.detectPDHs(value));
}
static detectUuids(value) {
let m;
const res = [];
while (m = UUID_REGEX_G.exec(value)) {
res.push(m);
}
return res;
}
static detectPDHs(value) {
let m;
const res = [];
while (m = PDH_REGEX_G.exec(value)) {
res.push(m);
}
return res;
}
static typeName(value) {
if (this.isPDH(value))
return 'collection';
if (this.isUuid(value))
return arvadosTypeName(value);
throw Error('Given value is neither an UUID nor a PDH: ' + value);
}
}
export default WBIdTools;

+ 20
- 0
frontend/src/js/arvados/base/wb-move-object.js View File

@@ -0,0 +1,20 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
function wbMoveObject(arvHost, arvToken, uuid, newOwnerUuid) {
const typeName = arvadosTypeName(uuid);
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + typeName + 's/' +
uuid, { 'method': 'PUT', 'data': JSON.stringify({
'owner_uuid': newOwnerUuid
}) });
}
export default wbMoveObject;

+ 23
- 0
frontend/src/js/arvados/base/wb-rename-object.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
function wbRenameObject(arvHost, arvToken, uuid, newName) {
const update = {
'name': newName
};
const typeName = arvadosTypeName(uuid);
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + typeName + 's/' +
uuid + '?' + typeName + '=' +
encodeURIComponent(JSON.stringify(update)),
{ 'method': 'PUT' });
}
export default wbRenameObject;

+ 23
- 0
frontend/src/js/arvados/base/wb-update-field.js View File

@@ -0,0 +1,23 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
function wbUpdateField(arvHost, arvToken, uuid, fieldName, fieldValue) {
const typeName = arvadosTypeName(uuid);
const data = {};
data[fieldName] = fieldValue;
const prom = makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/' + typeName + 's/' + uuid, {
method: 'PUT',
data: JSON.stringify(data)
});
return prom;
}
export default wbUpdateField;

+ 32
- 0
frontend/src/js/arvados/collection/wb-copy-collection.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import arvadosTypeName from 'arvados-type-name';
function wbCopyCollection(arvHost, arvToken, uuid, newOwnerUuid) {
const typeName = arvadosTypeName(uuid);
if (typeName !== 'collection')
throw Error('Specified UUID does not refer to a collection');
let prom = makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/collections/' + uuid);
prom = prom.then(xhr => {
const { name, description, properties, portable_data_hash,
manifest_text } = xhr.response;
const dup = { name: name + ' (Copied at ' + new Date().toISOString() + ')',
description, properties, portable_data_hash, manifest_text,
owner_uuid: newOwnerUuid };
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/collections', {
'method': 'POST',
'data': JSON.stringify(dup)
});
});
return prom;
}
export default wbCopyCollection;

+ 64
- 0
frontend/src/js/arvados/collection/wb-download-file.js View File

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//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
function wbDownloadFile(arvHost, arvToken,
manifestReader, path) {
const file = manifestReader.getFile(path);
const name = path.split('/').reverse()[0];
const blockRefs = file[0];
let prom = makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/keep_services');
prom = prom.then(xhr => {
const services = xhr.response['items'];
const proxies = services.filter(svc => (svc.service_type === 'proxy'));
const n = Math.floor(Math.random() * proxies.length);
const proxy = proxies[n];
const blocks = [];
let prom_2 = new Promise(accept => accept());
for (let i = 0; i < blockRefs.length; i++) {
const [ locator, position, size ] = blockRefs[i];
const prom_1 = makeArvadosRequest(
proxy.service_host + ':' + proxy.service_port,
arvToken,
'/' + locator,
{ 'useSsl': proxy.service_ssl_flag,
'responseType': 'arraybuffer' }
);
prom_2 = prom_2.then(() => prom_1);
prom_2 = prom_2.then(xhr => (blocks.push(xhr.response.slice(position,
position + size))));
}
prom_2 = prom_2.then(() => blocks);
return prom_2;
});
/* prom = prom.then(() => {
const blob = new Blob(blocks);
const url = window.URL.createObjectURL(blob);
const a = document.createElement('a');
a.href = url;
a.download = name;
a.click();
}); */
return prom;
}
export default wbDownloadFile;

+ 35
- 0
frontend/src/js/arvados/collection/wb-manifest-worker-wrapper.js View File

@@ -0,0 +1,35 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
class WBManifestWorkerWrapper {
constructor() {
this.worker = new Worker('/js/wb-manifest-worker.js');
this.worker.onmessage = e => this.onMessage(e);
this.worker.onerror = e => console.log(e);
this.queue = [];
}
onMessage(e) {
if (this.queue.length === 0)
throw Error('Unexpected message from worker');
const [msgType, accept, reject] = this.queue.splice(0, 1)[0];
if (e.data[0] === msgType + 'Result')
accept(e);
else
reject(e);
}
postMessage(m) {
const prom = new Promise((accept, reject) => {
this.queue.push([ m[0], accept, reject ]);
this.worker.postMessage(m);
});
return prom;
}
}
export default WBManifestWorkerWrapper;

+ 21
- 0
frontend/src/js/arvados/process/wb-input-spec-info.js View File

@@ -0,0 +1,21 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function wbInputSpecInfo(inputSpec) {
const isFile = (inputSpec.type === 'File' || inputSpec.type === 'File[]' ||
(inputSpec.type.type === 'array' && [].concat(inputSpec.type.items).indexOf('File') !== -1));
const isDirectory = (inputSpec.type === 'Directory' || inputSpec.type === 'Directory[]' ||
(inputSpec.type.type === 'array' && [].concat(inputSpec.type.items).indexOf('Directory') !== -1));
const isArray = (inputSpec.type === 'File[]' || inputSpec.type === 'Directory[]' ||
inputSpec.type.type === 'array');
return { isFile, isDirectory, isArray };
}
export default wbInputSpecInfo;

+ 18
- 0
frontend/src/js/arvados/process/wb-parse-workflow-def.js View File

@@ -0,0 +1,18 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function wbParseWorkflowDef(text) {
let definition;
try {
definition = JSON.parse(text);
} catch (_) {
definition = jsyaml.load(text);
}
return definition;
}
export default wbParseWorkflowDef;

+ 18
- 0
frontend/src/js/arvados/process/wb-process-misc.js View File

@@ -0,0 +1,18 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function encodeURIComponentIncludingDots(s) {
return encodeURIComponent(s).replace('.', '%2E');
}
function parseKeepRef(value) {
if (value && typeof(value) === 'object' && 'location' in value && value.location.startsWith('keep:'))
return value.location.substr(5);
return value;
}
export { encodeURIComponentIncludingDots, parseKeepRef }

+ 27
- 0
frontend/src/js/arvados/process/wb-process-state-name.js View File

@@ -0,0 +1,27 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
function wbProcessStateName(containerRequest, container) {
const cr = containerRequest;
const c = container;
if (!c)
return cr.state;
if (cr.state !== 'Uncommitted' && cr.priority === 0)
return 'Cancelled';
if (cr.state === 'Uncommitted' || !cr.container_uuid || c.state === 'Queued' || c.state === 'Locked')
return 'Pending';
if (c.state === 'Running')
return 'Running';
if (c.state === 'Complete' && c.exit_code === 0)
return 'Complete';
if (c.state === 'Complete' && c.exit_code !== 0)
return 'Failed';
if (c.state === 'Cancelled')
return 'Cancelled';
}
export default wbProcessStateName;

+ 169
- 0
frontend/src/js/arvados/process/wb-submit-container-request.js View File

@@ -0,0 +1,169 @@
//
// Copyright (C) Stanislaw Adaszewski, 2020
// Contact: s.adaszewski@gmail.com
// Website: https://adared.ch/wba
// License: GPLv3
//
import makeArvadosRequest from 'make-arvados-request';
import wbUuidsToCwl from 'wb-uuids-to-cwl';
function wbParseWorkflowInputs(workflowDefinition, userInputs, errors) {
// first see if all inputs are parseable
const inputs = {};
const main = workflowDefinition['$graph'].find(a => (a.id === '#main'));
for (let k in userInputs) {
try {
let val = jsyaml.safeLoad(userInputs[k]);
val = wbUuidsToCwl(val);
k = k.split('/').slice(1).join('/');
inputs[k] = (val === undefined ? null : val);
} catch (exc) {
errors.push('Error parsing ' + k + ': ' + exc.message);
}
}
return inputs;
}
function ensureSubProject(arvHost, arvToken, projectUuid) {
const filters = [
[ 'group_class', '=', 'project' ],
[ 'owner_uuid', '=', projectUuid ],
[ 'properties.type', '=', 'daily_process_subproject_container' ]
];
let prom = makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/groups?filters=' + encodeURIComponent(JSON.stringify(filters)));
prom = prom.then(xhr => {
if (xhr.response.items.length === 0) {
let prom_1 = new Promise(accept => accept());
prom_1 = prom_1.then(() => makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/groups', { method: 'POST',
data: JSON.stringify({ owner_uuid: projectUuid,
group_class: 'project',
name: 'Container for daily sub-projects for processes',
properties: { type: 'daily_process_subproject_container' } }) }));
prom_1 = prom_1.then(xhr_1 => xhr_1.response.uuid);
return prom_1;
}
return xhr.response.items[0].uuid;
});
let date = new Date();
date = (date.getYear() + 1900) + '-' +
('00' + (date.getMonth() + 1)).slice(-2) + '-' +
('00' + date.getDate()).slice(-2);
let containerUuid;
prom = prom.then(uuid => {
containerUuid = uuid;
const filters_1 = [
[ 'group_class', '=', 'project'],
[ 'owner_uuid', '=', containerUuid ],
[ 'properties.type', '=', 'daily_process_subproject' ],
[ 'properties.date', '=', date ]
];
return makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/groups?filters=' + encodeURIComponent(JSON.stringify(filters_1)));
});
prom = prom.then(xhr => {
if (xhr.response.items.length === 0) {
let prom_1 = new Promise(accept => accept());
prom_1 = prom_1.then(() => makeArvadosRequest(arvHost, arvToken,
'/arvados/v1/groups', { method: 'POST',
data: JSON.stringify({ owner_uuid: containerUuid,
group_class: 'project',
name: 'Daily processes sub-project for ' + date,
properties: { type: 'daily_process_subproject', date } }) }));
prom_1 = prom_1.then(xhr => xhr.response.uuid);
return prom_1;
}
return xhr.response.items[0].uuid;
});
return prom;
}
// params:
// arvHost, arvToken, inputs,
// projectUuid, workflowDefinition, workflowUuid
// processName, processDescription, placeInSubProject
function wbSubmitContainerRequest(params) {
const { workflowDefinition, workflowUuid,
processName, processDescription, inputs,
arvHost, arvToken,
placeInSubProject } = params;
let { projectUuid } = params;
let prom = new Promise(accept => accept());
if (placeInSubProject) {
prom = prom.then(() => ensureSubProject(arvHost, arvToken, projectUuid));
prom = prom.then(subProjUuid => (projectUuid = subProjUuid));
}
prom = prom.then(() => {
// prepare a request
const req = {
name: processName,
description: processDescription,
owner_uuid: projectUuid,
container_image: 'arvados/jobs',
properties: {
template_uuid: workflowUuid
},
runtime_constraints: {
API: true,
vcpus: 1,
ram: 1073741824